STEPTRACKERMICROBIOLOGY + PULMONOLOGY | INFECTIONS BY SYSTEM | HIGH-YIELD REVIEW

Pneumonia by Setting & Age

The likeliest organism depends on where the patient caught it, how old they are, and what host factor they carry — then the X-ray pattern and one clue confirm it.

FOCUS ON
Community-acquired: S pneumoniae most common at every adult age (lobar, rusty sputum); atypicals (Mycoplasma, Chlamydophila, Legionella) in young adults or with GI/neuro features; H influenzae and Moraxella in COPD; S aureus after influenza; Klebsiella in alcoholics. Hospital/ventilator: Pseudomonas, MRSA, Enterobacterales. Aspiration: oral anaerobes → abscess. By age: neonates — GBS, E coli; infants — RSV, C trachomatis (afebrile staccato cough); children — viruses, Mycoplasma, pneumococcus. Patterns: lobar (pneumococcus, Klebsiella), bronchopneumonia (S aureus, H flu, Pseudomonas), interstitial (viruses, Mycoplasma, Pneumocystis), cavity (S aureus, Klebsiella, anaerobes, TB).
SETTING · HOST
LIKELY ORGANISMS
CLUE
EMPIRIC APPROACH
Healthy adult outpatient
S pneumoniae, Mycoplasma, Chlamydophila, H influenzae, respiratory viruses
Lobar consolidation (pneumococcus) vs patchy, mild "walking" (atypical)
Amoxicillin or doxycycline (macrolide where resistance low)
Inpatient community-acquired
Same + Legionella, S aureus, gram-negatives
Urine antigens for pneumococcus and Legionella
Ceftriaxone + azithromycin, or respiratory fluoroquinolone
After influenza
S aureus (MRSA), S pneumoniae, H influenzae
Second fever, necrotizing or cavitating pneumonia
Add vancomycin or linezolid if MRSA suspected
Alcohol use disorder
S pneumoniae, Klebsiella, oral anaerobes
Currant-jelly sputum, upper-lobe cavity · foul sputum
Cover anaerobes if aspiration
COPD, smoker
H influenzae, Moraxella, S pneumoniae, Legionella
Exacerbation with purulent sputum
—
Cystic fibrosis
S aureus (childhood), Pseudomonas (later), Burkholderia
Mucoid colonies
Antipseudomonal combinations
Hospital / ventilator-associated
Pseudomonas, MRSA, Klebsiella, Acinetobacter, E coli
Onset ≥ 48 h after admission
Antipseudomonal β-lactam + MRSA coverage per risk
Aspiration
Oral anaerobes (Bacteroides, Prevotella, Fusobacterium, Peptostreptococcus)
Seizure, stroke, alcohol, dental disease; RLL superior or RUL posterior segment
Ampicillin-sulbactam or clindamycin
Neonate (< 4 weeks)
Group B strep, E coli, Listeria
Sepsis picture
Ampicillin + gentamicin
Infant 1–3 months, afebrile
C trachomatis
Staccato cough, conjunctivitis history, eosinophilia
Azithromycin (pyloric stenosis risk)
Children & teens
RSV and viruses (young), Mycoplasma (school age), S pneumoniae
Wheezing infant · teen with headache, cold agglutinins
Amoxicillin; macrolide for Mycoplasma
Exposure clues
Legionella (AC/water), C psittaci (birds), Coxiella (livestock), Francisella (rabbits), hantavirus (rodents), fungi (region)
Ask about travel, animals, work
See 4.07 and 8.01
Immunocompromised
Pneumocystis, CMV, Aspergillus, Nocardia, TB, Cryptococcus
CD4 count, neutropenia, transplant timing
See 10.07

Mechanism — how organisms reach the alveoli

Microaspiration of colonizersPneumococcus, H flu
Large-volume aspirationAnaerobes
Inhaled aerosolLegionella, TB, fungi
Blood-borneS aureus (IV drugs, septic emboli)

Defenses breached: cough reflex, mucociliary clearance (smoking, CF, influenza), alveolar macrophages and complement.

X-ray pattern → organism

PATTERN
DESCRIPTION
ORGANISMS
Lobar
One lobe, air bronchograms
S pneumoniae, Klebsiella, Legionella
Bronchopneumonia
Patchy, multifocal around airways
S aureus, H influenzae, Pseudomonas
Interstitial
Diffuse reticular / ground glass
Viruses, Mycoplasma, Pneumocystis, Chlamydophila
Cavitary
Necrosis with air-fluid level
S aureus, Klebsiella, anaerobes, TB, fungi

How it's tested

COMMON CONFUSIONTypical (abrupt, high fever, productive, lobar) vs atypical (gradual, dry cough, extrapulmonary symptoms, patchy) — atypicals don't respond to β-lactams.
THE TRAPPneumococcus remains the most common cause of community pneumonia even in young adults — "atypical" is the classic, not the most frequent.
YOUR APPROACHSetting (community, hospital, aspiration) → age → host factor → X-ray pattern → one exposure clue → coverage.

If you see… think…

Abrupt fever, rigors, rusty sputum, lobar consolidation → S pneumoniae
College student, dry cough, headache, cold agglutinins → Mycoplasma
Pneumonia + diarrhea + hyponatremia → Legionella
Cavitating pneumonia a week after the flu → S aureus
Alcoholic with currant-jelly sputum → Klebsiella
Foul sputum, RLL superior segment abscess after a seizure → anaerobic aspiration
Ventilated patient on day 6 with new infiltrate → Pseudomonas, MRSA
Afebrile 6-week-old with staccato cough → C trachomatis
Newborn with pneumonia and sepsis → group B strep
Bird owner with pneumonia and splenomegaly → C psittaci