STEPTRACKERGENETICS + ENDOCRINOLOGY | CHROMOSOMAL DISORDERS | HIGH-YIELD REVIEW

Deletions & Sex Chromosome Disorders

Small missing pieces with big syndromes, and the sex-chromosome counts that change growth, puberty and fertility.

FOCUS ON
22q11.2 (DiGeorge/velocardiofacial): CATCH-22 — cleft palate, abnormal facies, thymic aplasia (T cells ↓), cardiac (truncus, tetralogy), hypocalcemia (no parathyroids). Williams 7q11.23: elfin face, cocktail personality, hypercalcemia, supravalvular aortic stenosis. Cri-du-chat 5p−: cat cry, microcephaly. Turner 45,X: short, streak ovaries, coarctation, horseshoe kidney. Klinefelter 47,XXY: tall, small firm testes, gynecomastia.
SYNDROME
GENETICS
FEATURES
CLUE · LABS
22q11.2 deletion
DiGeorge · velocardiofacial
Microdeletion → 3rd/4th pharyngeal pouch maldevelopment
Cleft palate, abnormal face, thymic aplasia, conotruncal heart defects, hypocalcemia (tetany)
FISH or microarray · psychiatric illness later
Williams syndrome
7q11.23 (incl. elastin)
Microdeletion
Elfin face, extremely friendly, verbal strengths, ID, supravalvular aortic stenosis, renal artery stenosis
Hypercalcemia (↑ vitamin D sensitivity)
Cri-du-chat
5p deletion
Terminal deletion
High-pitched cat-like cry, microcephaly, severe ID, epicanthal folds, VSD
"Cry of the cat = chromosome 5"
Turner syndrome
45,X
Most often paternal nondisjunction or loss; mosaicism common
Short stature, webbed neck, shield chest, lymphedema of hands/feet, streak ovaries (primary amenorrhea), bicuspid aortic valve, coarctation, horseshoe kidney
↑ FSH/LH, ↓ estrogen · GH and estrogen therapy · Y material → gonadoblastoma
Klinefelter syndrome
47,XXY
Nondisjunction (either parent)
Tall, eunuchoid proportions, small firm testes, infertility, gynecomastia, female hair pattern, mild learning issues
↓ Testosterone, ↑ FSH (Sertoli/inhibin ↓), ↑ LH · Barr body present
Double Y males
47,XYY
Paternal meiosis II nondisjunction
Tall, severe acne, normal fertility, learning/behavioral issues
Usually undiagnosed
Triple X
47,XXX
Nondisjunction
Tall, often normal; some learning delay, early menopause
Two Barr bodies
Androgen insensitivity
46,XY · AR gene
Testes make testosterone, but receptors don't respond
Female external genitalia, blind vagina, no uterus, undescended testes, breasts present
↑ Testosterone, ↑ LH · remove testes after puberty
5α-Reductase deficiency
46,XY · AR
Can't make DHT
Ambiguous genitalia at birth, virilize at puberty
Normal testosterone and LH, ↓ DHT
Kallmann syndrome
GnRH neurons fail to migrate (KAL1 and others)
Delayed puberty + anosmia
↓ GnRH, FSH, LH, sex steroids
Microdeletion detection
Too small for karyotype
FISH (targeted) or chromosomal microarray
See 4.02

Mechanism — Klinefelter hormones

Extra XSeminiferous tubule dysgenesis
→
↓ Inhibin→ ↑ FSH
→
Leydig dysfunction↓ Testosterone → ↑ LH
→
↑ Estradiol : testosteroneGynecomastia

Turner vs Klinefelter

FEATURE
TURNER 45,X
KLINEFELTER 47,XXY
Height
Short
Tall
Gonads
Streak ovaries
Small firm testes
FSH / LH
↑ (hypergonadotropic)
↑ (hypergonadotropic)
Heart
Bicuspid valve, coarctation
—
Barr body
None
One

How it's tested

COMMON CONFUSIONAndrogen insensitivity (no receptor response, female look, high testosterone) vs 5α-reductase deficiency (ambiguous at birth, masculinizes at puberty, low DHT).
THE TRAPDiGeorge presents in the newborn as hypocalcemic seizures and a heart defect — the immune problem appears later.
YOUR APPROACHSmall deletion → FISH/microarray syndrome (face + heart + calcium); sex chromosome → height, gonad, gonadotropins, Barr bodies.

If you see… think…

Newborn with tetany, truncus arteriosus, absent thymus → 22q11 deletion
Elfin face, very sociable, hypercalcemia, supravalvular AS → Williams
High-pitched cat-like cry → cri-du-chat (5p−)
Short girl, webbed neck, primary amenorrhea → Turner
Lymphedema of hands and feet in a newborn girl → Turner
Tall infertile man, small firm testes, gynecomastia → Klinefelter
Phenotypic female, no uterus, inguinal testes → androgen insensitivity
Ambiguous genitalia that virilize at puberty → 5α-reductase deficiency
Delayed puberty + can't smell → Kallmann
Normal karyotype, suspected microdeletion → FISH or microarray